Function reference • spots

Moran's Functions to calculate univariate and multivariate Moran’s I
`BivariateMoransI()`	Bivariate Moran's I
`FitMoransI()`	Fitted values of Moran's I
`IrregularData()`	Process irregular data shape (between two groups) for Moran's I
`IrregularMoransI()`	Moran's I between two groups (irregular data shape)
`OLSMoransI()`	Moran's I using ordinary least squares (OLS)
`PermutationMoransI()`	Permutation based Moran's I
`UnivariateMoransI()`	Univariate Moran's I
Local Indicators of Spatial Association Functions to calculate local spatial statistics
`LocalGi()`	Local Getis-Ord Gi or Gi* statistics for spatial hot spot analysis
`LocalMoransI()`	Local Moran's I
`PermutationGi()`	Permutation based Getis-Ord Gi or Gi* statistics for spatial hots pot analysis
`PermutationLocalI()`	Permutation based local Moran's I
Spatial Component Analysis Functions for Spatial Component Analysis (SCA)
`LeeL()`	Bivariate Moran's I using Lee's L measurement
`SCA()`	Spatial Component Analysis
`SpatialXCorr()`	Spatial cross-correlation
`WartenbergM()`	Bivariate Moran's I using Wartenberg's M matrix
Hexagonal Nearest Neighbor Functions related to Hexagonal Nearest Neighbor (HNN) calculation
`HnnImpute()`	Hexagonal nearest neighbor based imputation
`HnnNeighbor()`	Hexagonal nearest neighbor
`HnnWeight()`	Hexagonal nearest neighbor weight
`VisiumHnn()`	10x Genomics Visium hexagonal nearest neighbor
Statistical Tests Functions related to test statistics
`BivariateMoransIStats()`	Bivariate Moran's I statistics
`LocalMoransIStats()`	Local Moran's I statistics
`PermutationCorr()`	Permutation based p-value for Pearson's correlation coefficient
`ZPvalue()`	P-value of Z scores
Datasets Available datasets to load
`LoadData()`	Load selected data
`available.data`	Available data
Package Information
`spots-package`	spots: Spatial Component Analysis

Reference

Moran's

Local Indicators of Spatial Association

Spatial Component Analysis

Hexagonal Nearest Neighbor

Statistical Tests

Datasets

Package Information